BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G05SP1|AL428107
(1012 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig878 1923 0.0
>3x_Contig878
Length = 4897
Score = 1923 bits (967), Expect = 0.0
Identities = 1001/1012 (98%), Gaps = 4/1012 (0%)
Strand = Plus / Plus
Query: 1 gtaccatttttsttttgttatgaccacccgcgaaccaccagtacttttccccagaggttt 60
||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 356 gtaccatttttgttttgttatgaccaccgg--aaccaccagtacttttccccagaggttt 413
Query: 61 caaacctatccattgtctttgcaatgcgtctctcaagctggtaacatcygctaaaatgaa 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 414 caaacctatccattgtctttgcaatgcgtctctcaagctggtaacatctgctaaaatgaa 473
Query: 121 tccagtcttccgttcatagcacactgtgacaccgtataacaactgtccagtatggcgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tccagtcttccgttcatagcacactgtgacaccgtataacaactgtccagtatggcgtaa 533
Query: 181 agcgcatcgatacttgcccagatgctaatatttggcaagcatgaggaatggaaactttga 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ag-gcatcgatacttgcccagatgctaatatttggcaagcatgaggaatggaaactttga 592
Query: 241 ctatctctcttttcttcacattcactgagtgggacgctcccaaactggataacaaccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ctatctctcttttcttcacattcactgagtgggacgctcccaaactggataacaaccaca 652
Query: 301 ctgttgcaatgttctgatcttgggctattctgactcccacctcygccattatgtgaacga 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 653 ctgttgcaatgttctgatcttgggctattctgactcccacctctgccattatgtgaacga 712
Query: 361 gtttcctagcaacaataacctgtttagaactctgtgtattgacatacacatcgatatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gtttcctagcaacaataacctgtttagaactctgtgtattgacatacacatcgatatagt 772
Query: 421 tttactcataaatattaatgagaagtaacaactaacgaactttaagaaataaggagcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tttactcataaatattaatgagaagtaacaactaacgaactttaagaaataaggagcact 832
Query: 481 ttttattttattatcaatttagccgccgagcgtcctctgaatcgtttcaagatgcaacgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ttttattttattatcaatttagccgccgagcgtcctctgaatcgtttcaagatgcaacgc 892
Query: 541 gtataamacgattcagaggtcacgtgatcaatatggatagcattccattttctttattct 600
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 gtataaaacgattcagaggtcacgtgatcaatatggatagcattccattttctttattct 952
Query: 601 ctcgacttctgtttctgcatacaataatgtctaacagcagtaatcaagaacaataaaata 660
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 953 ctcgacttctgtttctgcatacaataatgtctaatagcagtaatcaagaacaataaaata 1012
Query: 661 aggaaaatgtaaaagaacagaggcaaatacacggctattcctcgatatctgttaagataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 aggaaaatgtaaaagaacagaggcaaatacacggctattcctcgatatctgttaagataa 1072
Query: 721 ttctctcagtttgtacagtaaccaaccgcatatctcaatagcaaaccaacaataatcatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 ttctctcagtttgtacagtaaccaaccgcatatctcaatagcaaaccaacaataatcatg 1132
Query: 781 gaaagcggcaaagacgctgaaaatcagcctgtattgttcatgggagcacaaactgaaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 gaaagcggcaaagacgctgaaaatcagcctgtattgttcatgggagcacaaactgaaaat 1192
Query: 841 ttagattacatgtatgaactagtgcatgaactttccgcccaattgaaaacgaacgaaaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 ttagattacatgtatgaactagtgcatgaactttccgcccaattgaaaacgaacgaaaat 1252
Query: 901 atgagagatgctgttttgcaggatgtggaccttctatccaggcagttgaaccatggcaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 atgagagatgctgttttgcaggatgtggaccttctatccaggcagttgaaccatggcaat 1312
Query: 961 gtggacgtatcaccggacatcaatgtcacaaagccaatttatatacmaaagg 1012
||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1313 gtggacgtatcaccggacatcaatgtcacaaag-caatttatatacaaaagg 1363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6878
Number of Sequences: 1807
Number of extensions: 6878
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 1012
length of database: 10,358,551
effective HSP length: 16
effective length of query: 996
effective length of database: 10,329,639
effective search space: 10288320444
effective search space used: 10288320444
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)